BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003H04LP1|AL425194
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig654 1756 0.0
>3x_Contig654
Length = 2117
Score = 1756 bits (876), Expect = 0.0
Identities = 900/918 (98%)
Strand = Plus / Plus
Query: 1 ctttcctggwtcgaataccaccagggaaaacaggataataacgacgttgttccaatatat 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ctttcctggttcgaataccaccagggaaaacaggataataacgacgttgttccaatatat 853
Query: 61 gttctgagactctatcamatctgttccgctggaaaacgttgccacctttagtgacttctt 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gttctgagactctatcaaatctgttccgctggaaaacgttgccacctttagtgacttctt 913
Query: 121 tcagatctttgtmaatmtcaatgtttgaacagccaaagaagatctcattgagttggaatg 180
|||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tcagatctttgtaaatatcattgtttgaacagccaaagaagatctcattgagttggaatg 973
Query: 181 tacttgggtttgtgaagcatttgaagtttttaggcmaactcaagtatttcctatctmatg 240
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 974 tacttgggtttgtgaagcatttgaagtttttaggcaaactcaagtatttcctatctaatg 1033
Query: 241 amtcctgcgggtacgctgcatgtttggaagtgacttctttcgtggaaggaatcammataa 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1034 aatcctgcgggtacgctgcatgtttggaagtgacttctttcgtggaaggaatcaaaataa 1093
Query: 301 cttgaatcttgggatttatgcgtttcagtattggtgctattaccttgataaatacttcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 cttgaatcttgggatttatgcgtttcagtattggtgctattaccttgataaatacttcgt 1153
Query: 361 ctagggttttcggctgttgtttaagatttgggaaatcaggtatattaccactggatatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 ctagggttttcggctgttgtttaagatttgggaaatcaggtatattaccactggatatta 1213
Query: 421 gttgatgtgtgatatccaaaaatggaccgaacatgattaggatgtgcggtttgatggaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 gttgatgtgtgatatccaaaaatggaccgaacatgattaggatgtgcggtttgatggaag 1273
Query: 481 tattgattctgtccacaaaatgttctaggttggcmaastctaggttattggcaggtgtgt 540
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1274 tattgattctgtccacaaaatgttctaggttggaaaagtctaggttattggcaggtgtgt 1333
Query: 541 atgagccagccgtcactacaacyttcattggctgattgttcaaagttatctgggaatctt 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1334 atgagccagccgtcactacaactttcattggctgattgttcaaagttatctgggaatctt 1393
Query: 601 gaagcatttctgagtccgaaacaggagagttcaaatacggaatctttagaatatcctcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 gaagcatttctgagtccgaaacaggagagttcaaatacggaatctttagaatatcctcta 1453
Query: 661 ctacaaaatattctccgttagcatttttccccttgagtgcgacgatttgaccaggaaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 ctacaaaatattctccgttagcatttttccccttgagtgcgacgatttgaccaggaaaca 1513
Query: 721 ctgataagttttgaatcttctcgaagtttagccttattcttctaccgatgcctgtcgatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1514 ctgataagttttgaatcttctcgaagtttagccttattcttctaccgatgcctgtcgatc 1573
Query: 781 tarawgtttctatagctagagagtcaacatttagcggaccctcggcattaacagagtctg 840
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1574 tagatgtttctatagctagagagtcaacatttagcggaccctcggcattaacagagtctg 1633
Query: 841 gcacaatccttccaacagtataaacctctgattgttgttgggaagtagggtcgccgatat 900
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1634 gcacaatccttccaacagtataaacctctgattgttgttggaaagtagggtcgccgatat 1693
Query: 901 ctgatggtttwagattat 918
|||||||||| |||||||
Sbjct: 1694 ctgatggtttaagattat 1711
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5456
Number of Sequences: 1807
Number of extensions: 5456
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)